Search results for "fusion [photon photon]"

showing 10 items of 724 documents

Levansucrases from Pseudomonas syringae pv. tomato and P. chlororaphis subsp. aurantiaca: Substrate specificity, polymerizing properties and usage of…

2011

Levansucrases of Pseudomonas syringae pv. tomato DC3000 (Lsc3) and Pseudomonas chlororaphis subsp. aurantiaca (also Pseudomonas aurantiaca) (LscA) have 73% identity of protein sequences, similar substrate specificity and kinetic properties. Both enzymes produce levan and fructooligosaccharides (FOS) of varied length from sucrose, raffinose and sugar beet molasses. A novel high-throughput chip-based nanoelectrospray mass spectrometric method was applied to screen alternative fructosyl acceptors for levansucrases. Lsc3 and LscA could both transfructosylate D-xylose, D-fucose, L- and D-arabinose, D-ribose, D-sorbitol, xylitol, xylobiose, D-mannitol, D-galacturonic acid and methyl-α-D-glucopyra…

Spectrometry Mass Electrospray IonizationSucroseRecombinant Fusion ProteinsMolecular Sequence DataPseudomonas syringaeBioengineeringFructoseXylitolApplied Microbiology and BiotechnologySubstrate SpecificityStructure-Activity Relationshipchemistry.chemical_compoundRaffinoseBacterial ProteinsPseudomonasPseudomonas aurantiacaPseudomonas syringaeXylobioseHistidineAmino Acid SequenceRaffinoseHistidinebiologySubstrate (chemistry)General Medicinebiology.organism_classificationPseudomonas chlororaphisFructansHexosyltransferaseschemistryBiochemistryMutagenesis Site-DirectedChromatography Thin LayerOligopeptidesSequence AlignmentBiotechnologyJournal of Biotechnology
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On first exit times and their means for Brownian bridges

2017

For a Brownian bridge from $0$ to $y$ we prove that the mean of the first exit time from interval $(-h,h), \,\, h>0,$ behaves as $O(h^2)$ when $h \downarrow 0.$ Similar behavior is seen to hold also for the 3-dimensional Bessel bridge. For Brownian bridge and 3-dimensional Bessel bridge this mean of the first exit time has a puzzling representation in terms of the Kolmogorov distribution. The result regarding the Brownian bridge is applied to prove in detail an estimate needed by Walsh to determine the convergence of the binomial tree scheme for European options.

Statistics and ProbabilityBessel processGeneral Mathematics010102 general mathematicsMathematical analysisProbability (math.PR)Brownian bridge01 natural sciencesBridge (interpersonal)010104 statistics & probabilitysymbols.namesakeDistribution (mathematics)Diffusion processMathematics::ProbabilitysymbolsFOS: MathematicsBinomial options pricing model0101 mathematicsStatistics Probability and UncertaintyMathematics - ProbabilityBessel functionBrownian motionMathematics
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Ergodicity for a stochastic Hodgkin–Huxley model driven by Ornstein–Uhlenbeck type input

2013

We consider a model describing a neuron and the input it receives from its dendritic tree when this input is a random perturbation of a periodic deterministic signal, driven by an Ornstein-Uhlenbeck process. The neuron itself is modeled by a variant of the classical Hodgkin-Huxley model. Using the existence of an accessible point where the weak Hoermander condition holds and the fact that the coefficients of the system are analytic, we show that the system is non-degenerate. The existence of a Lyapunov function allows to deduce the existence of (at most a finite number of) extremal invariant measures for the process. As a consequence, the complexity of the system is drastically reduced in c…

Statistics and ProbabilityDegenerate diffusion processesWeak Hörmander conditionType (model theory)01 natural sciencesPeriodic ergodicity010104 statistics & probability60H0760J25FOS: Mathematics0101 mathematicsComputingMilieux_MISCELLANEOUSMathematical physicsMathematics60J60Quantitative Biology::Neurons and CognitionProbability (math.PR)010102 general mathematicsErgodicityOrnstein–Uhlenbeck processHodgkin–Huxley model[MATH.MATH-PR]Mathematics [math]/Probability [math.PR]Hodgkin–Huxley model60J60 60J25 60H07Statistics Probability and UncertaintyTime inhomogeneous diffusion processesMathematics - Probability
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Fractional Brownian motion and Martingale-differences

2004

Abstract We generalize a result of Sottinen (Finance Stochastics 5 (2001) 343) by proving an approximation theorem for the fractional Brownian motion, with H> 1 2 , using martingale-differences.

Statistics and ProbabilityGeometric Brownian motionFractional Brownian motionMathematics::ProbabilityDiffusion processReflected Brownian motionMathematical analysisBrownian excursionStatistics Probability and UncertaintyHeavy traffic approximationMartingale (probability theory)Martingale representation theoremMathematicsStatistics & Probability Letters
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Phase transformation kinetics in d-dimensional grains-containing systems: diffusion-type model

1998

Abstract An analytical approach to the phase transformation in d-dimensional grains-containing complex systems is offered. It is based on considering the mechanism of surface material exchange among neighbouring grains as the so-called state-dependent diffusion process, where the diffusion function is related to the magnitude of the grain boundary. The approach proposed deals with the kinetics of that ensemble under circumstances of a volume increase of the new phase or microstructure. Probabilistic characteristics of the process are derived and analyzed. A comparison with 2D modelling of similar kind is presented for the 3D case, and some possible practical realizations of the situation un…

Statistics and ProbabilityGrain growthMaterials scienceTransformation (function)Diffusion processPhase (matter)Complex systemThermodynamicsGrain boundary diffusion coefficientGrain boundaryDiffusion (business)Condensed Matter PhysicsPhysica A: Statistical Mechanics and its Applications
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On a set of data for the membrane potential in a neuron

2006

We consider a set of data where the membrane potential in a pyramidal neuron is measured almost continuously in time, under varying experimental conditions. We use nonparametric estimates for the diffusion coefficient and the drift in view to contribute to the discussion which type of diffusion process is suitable to model the membrane potential in a neuron (more exactly: in a particular type of neuron under particular experimental conditions).

Statistics and ProbabilityModels NeurologicalNeural ConductionAction PotentialsTetrodotoxinType (model theory)Statistics NonparametricGeneral Biochemistry Genetics and Molecular BiologyMembrane PotentialsSet (abstract data type)MiceStatisticsAnimalsDiffusion (business)MathematicsCerebral CortexNeuronsMembrane potentialStochastic ProcessesQuantitative Biology::Neurons and CognitionGeneral Immunology and MicrobiologyStochastic processPyramidal CellsApplied MathematicsNonparametric statisticsGeneral MedicineElectrophysiologyElectrophysiologynervous systemDiffusion processModeling and SimulationPotassiumGeneral Agricultural and Biological SciencesBiological systemAlgorithmsMathematical Biosciences
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Identification of a Terphenyl Derivative that Blocks the Cell Cycle in the G0−G1 Phase and Induces Differentiation in Leukemia Cells

2006

To further explore the SAR of resveratrol-related trans-stilbene derivatives, here we describe the synthesis of (a) a series of 3,5-dimethoxy analogues in which a variety of substituents were introduced at positions 2', 3', 4', and 5' of the stilbene scaffold and (b) a second group of derivatives (2-phenylnaphthalenes and terphenyls) that incorporate a phenyl ring as a bioisosteric replacement of the stilbene alkenyl bridge. We thoroughly characterized all of the new compounds with respect to their apoptosis-inducing activity and their effects on the cell cycle. One of the new derivatives, 13g, behaved differently from the others, as it was able to block the cell cycle in the G(0)-G(1) phas…

StereochemistryCellular differentiationFusion Proteins bcr-ablAntineoplastic AgentsApoptosis.ResveratrolResting Phase Cell CycleChemical synthesisStructure-Activity Relationshipchemistry.chemical_compoundLeukemia Promyelocytic AcuteCell Line TumorTerphenyl CompoundsTerphenylStilbenesDrug DiscoveryHumansStructure–activity relationshipATP Binding Cassette Transporter Subfamily B Member 1G1 PhaseCell DifferentiationCell cycleIn vitrochemistryDrug Resistance NeoplasmResveratrolCell cultureMolecular MedicineDrug Screening Assays AntitumorJournal of Medicinal Chemistry
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Crystallization and preliminary X-ray studies of mouse centrin1.

2005

The expression, purification, crystallization and preliminary X-ray diffraction studies of mouse centrin1 are reported. Centrins belong to a family of Ca{sup 2+}-binding EF-hand proteins that play a fundamental role in centrosome duplication and the function of cilia. To shed light on the structure–function relationship of these proteins, mouse centrin1 has been crystallized. The mouse centrin1 has been expressed in Escherichia coli as a GST-centrin fusion protein containing a thrombin protease cleavage site between the fusion partners. Two constructs with different linking-sequence lengths were expressed and purified. Thrombin cleavage yielded functional centrin1 and N-terminally extended …

StereochemistryChromosomal Proteins Non-HistoneMolecular Sequence DataBiophysicsmacromolecular substancesCleavage (embryo)Crystallography X-RayBiochemistrylaw.inventionchemistry.chemical_compoundMiceStructure-Activity RelationshipThrombinStructural BiologylawGeneticsmedicineEscherichia coliAnimalsCentrosome duplicationAmino Acid SequenceCrystallizationDose-Response Relationship DrugCalcium-Binding ProteinsSpace groupCondensed Matter PhysicsFusion proteinRecombinant ProteinsCrystallographyenzymes and coenzymes (carbohydrates)KineticschemistryCrystallization CommunicationsX-ray crystallographybiological scienceshealth occupationsbacteriaCrystallizationEthylene glycolmedicine.drugActa crystallographica. Section F, Structural biology and crystallization communications
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Production of Hev b5 as a fluorescent biotin-binding tripartite fusion protein in insect cells

2005

The presented green fluorescent protein and streptavidin core-based tripartite fusion system provides a simple and efficient way for the production of proteins fused to it in insect cells. This fusion protein forms a unique tag, which serves as a multipurpose device enabling easy optimization of production, one-step purification via streptavidin-biotin interaction, and visualization of the fusion protein during downstream processing and in applications. In the present study, we demonstrate the successful production, purification, and detection of a natural rubber latex allergen Hev b5 with this system. We also describe the production of another NRL allergen with the system, Hev b1, which fo…

StreptavidinBiotin bindingRecombinant Fusion ProteinsGreen Fluorescent ProteinsBiophysicsBiotinEnzyme-Linked Immunosorbent AssayNanotechnologySpodopteraBiologyBiochemistryChromatography AffinityGreen fluorescent protein03 medical and health scienceschemistry.chemical_compoundBiotinAnimalsMolecular BiologyDNA PrimersPlant Proteins030304 developmental biology0303 health sciencesInsect cellDownstream processingBase Sequence030302 biochemistry & molecular biologyCell BiologyAllergensAntigens PlantFusion proteinFluorescencechemistryBiochemistryBaculoviridaeBiochemical and Biophysical Research Communications
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Recombinant avidin and avidin-fusion proteins.

2000

Both chicken egg-white avidin and its bacterial relative streptavidin are well known for their extraordinary high affinity with biotin (Kd approximately 10(-15) M). They are widely used as tools in a number of affinity-based separations, in diagnostic assays and in a variety of other applications. These methods have collectively become known as (strept)avidin-biotin technology. Biotin can easily and effectively be attached to different molecules, termed binders and probes, without destroying their biological activity. The exceptional stability of the avidin-biotin complex and the wide range of commercially available reagents explain the popularity of this system. In order by genetic enginee…

StreptavidinInsectaAffinity labelRecombinant Fusion ProteinsBiotinBioengineeringProtein Engineeringlaw.inventionchemistry.chemical_compoundstomatognathic systemBiotinlawEscherichia coliAnimalsMolecular BiologybiologyCell MembraneAffinity LabelsProtein engineeringrespiratory systemAvidinFusion proteinRecombinant ProteinschemistryBiochemistryBiotinylationRecombinant DNAbiology.proteinBaculoviridaeChickensBiotechnologyAvidinBiomolecular engineering
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